SNP Detail For rs2277912
1.Mapping Information
Human SNP ID rs2277912
Human chromosome chr2
Human SNP position 206769512
Pig chromosome chr15
Pig SNP position 121593950
2.Annotation Information
PubMed ID20966902
JournalObesity (Silver Spring)
Linkwww.ncbi.nlm.nih.gov/pubmed/20966902
StudyGenome-wide association study of anthropometric traits and evidence of interactions with age and study year in Filipino women.
Disease/TraitHeight
Initial sample1,792 Filipino ancestry females
Replication sampleNA
Region2q33.3
Chromosome idchr2
Chromosome position206769512
Reported geneFASTKD2
Mapped geneFASTKD2
Upstream gene id
Downstream gene id
SNP gene ids22868
Upstream gene distance
Downstream gene distance
SNP risk allelers2277912-G
SNPsrs2277912
Merged0
SNP id current2277912
Contextintron_variant
Intergenic0
Allele frequency0.15
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta1.07
%95 Ci[0.62-1.52] cm increase
PlatformAffymetrix [2073674] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST000839