SNP Detail For rs2277546
1.Mapping Information
Human SNP ID rs2277546
Human chromosome chr15
Human SNP position 78791034
Pig chromosome chr7
Pig SNP position 53507775
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region15q25.1
Chromosome idchr15
Chromosome position78791034
Reported geneADAMTS7
Mapped geneADAMTS7
Upstream gene id
Downstream gene id
SNP gene ids11173
Upstream gene distance
Downstream gene distance
SNP risk allelers2277546-A
SNPsrs2277546
Merged0
SNP id current2277546
Contextintron_variant
Intergenic0
Allele frequency0.395
P value0.000001
Pvalue mlog6
P value text
Or beta0.01
%95 Ciunit decrease
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264