SNP Detail For rs2276498
1.Mapping Information
Human SNP ID rs2276498
Human chromosome chr20
Human SNP position 53993957
Pig chromosome chr17
Pig SNP position 61752614
2.Annotation Information
PubMed ID20889312
JournalSchizophr Res
Linkwww.ncbi.nlm.nih.gov/pubmed/20889312
StudyA genome-wide meta-analysis identifies novel loci associated with schizophrenia and bipolar disorder.
Disease/TraitBipolar disorder and schizophrenia
Initial sample651 European ancestry bipolar cases, 1,171 European ancestry schizophrenia cases, 2,412 European ancestry controls
Replication sampleNA
Region20q13.2
Chromosome idchr20
Chromosome position53993957
Reported geneNR
Mapped geneBCAS1
Upstream gene id
Downstream gene id
SNP gene ids8537
Upstream gene distance
Downstream gene distance
SNP risk allelers2276498-?
SNPsrs2276498
Merged0
SNP id current2276498
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta1.3111
%95 Ci[NR]
PlatformAffymetrix [722112]
CNVN
Mapped traitmental or behavioural disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000677
Study accessionGCST000821