Human SNP ID | rs2275906 |
---|---|
Human chromosome | chr6 |
Human SNP position | 25773581 |
Pig chromosome | chr7 |
Pig SNP position | 21805630 |
PubMed ID | 25811787 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25811787 |
Study | Modulation of Genetic Associations with Serum Urate Levels by Body-Mass-Index in Humans. |
Disease/Trait | Urate levels in lean individuals |
Initial sample | up to 5,529 European ancestry male individuals, up to 9,753 European ancestry female individuals |
Replication sample | NA |
Region | 6p22.2 |
Chromosome id | chr6 |
Chromosome position | 25773581 |
Reported gene | SLC17A1, SLC17A4, HIST1H2AA |
Mapped gene | SLC17A4 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 10050 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2275906-G |
SNPs | rs2275906 |
Merged | 0 |
SNP id current | 2275906 |
Context | synonymous_variant |
Intergenic | 0 |
Allele frequency | 0.13 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (men) |
Or beta | 0.125 |
%95 Ci | [0.07-0.18] kg/m2 decrease |
Platform | Affymetrix, Illumina [at least 188473] (imputed) |
CNV | N |
Mapped trait | urate measurement, underweight body mass index status |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004531, http://www.ebi.ac.uk/efo/EFO_0005936 |
Study accession | GCST002830 |