SNP Detail For rs2275906
1.Mapping Information
Human SNP ID rs2275906
Human chromosome chr6
Human SNP position 25773581
Pig chromosome chr7
Pig SNP position 21805630
2.Annotation Information
PubMed ID25811787
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/25811787
StudyModulation of Genetic Associations with Serum Urate Levels by Body-Mass-Index in Humans.
Disease/TraitUrate levels in lean individuals
Initial sampleup to 5,529 European ancestry male individuals, up to 9,753 European ancestry female individuals
Replication sampleNA
Region6p22.2
Chromosome idchr6
Chromosome position25773581
Reported geneSLC17A1, SLC17A4, HIST1H2AA
Mapped geneSLC17A4
Upstream gene id
Downstream gene id
SNP gene ids10050
Upstream gene distance
Downstream gene distance
SNP risk allelers2275906-G
SNPsrs2275906
Merged0
SNP id current2275906
Contextsynonymous_variant
Intergenic0
Allele frequency0.13
P value0.000009
Pvalue mlog5.04575749056067
P value text(men)
Or beta0.125
%95 Ci[0.07-0.18] kg/m2 decrease
PlatformAffymetrix, Illumina [at least 188473] (imputed)
CNVN
Mapped traiturate measurement, underweight body mass index status
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004531, http://www.ebi.ac.uk/efo/EFO_0005936
Study accessionGCST002830