SNP Detail For rs2275606
1.Mapping Information
Human SNP ID rs2275606
Human chromosome chr6
Human SNP position 146597814
Pig chromosome chr1
Pig SNP position 21274485
2.Annotation Information
PubMed ID22019778
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22019778
StudyIdentification of two new loci at IL23R and RAB32 that influence susceptibility to leprosy.
Disease/TraitLeprosy
Initial sample706 Han Chinese ancestry cases, 5,581 Han Chinese ancestry controls
Replication sample3,301 Han Chinese ancestry cases, 5,299 Han Chinese ancestry controls
Region6q24.3
Chromosome idchr6
Chromosome position146597814
Reported geneRAB32
Mapped geneLOC101928661
Upstream gene id
Downstream gene id
SNP gene ids101928661
Upstream gene distance
Downstream gene distance
SNP risk allelers2275606-A
SNPsrs2275606
Merged0
SNP id current2275606
Contextintron_variant
Intergenic0
Allele frequency0.21
P value0.00000000000004
Pvalue mlog13.397940008672
P value text
Or beta1.3
%95 Ci[1.21-1.39]
PlatformNR [1701673] (imputed)
CNVN
Mapped traitleprosy
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001054
Study accessionGCST001292