Human SNP ID | rs2275606 |
---|---|
Human chromosome | chr6 |
Human SNP position | 146597814 |
Pig chromosome | chr1 |
Pig SNP position | 21274485 |
PubMed ID | 22019778 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22019778 |
Study | Identification of two new loci at IL23R and RAB32 that influence susceptibility to leprosy. |
Disease/Trait | Leprosy |
Initial sample | 706 Han Chinese ancestry cases, 5,581 Han Chinese ancestry controls |
Replication sample | 3,301 Han Chinese ancestry cases, 5,299 Han Chinese ancestry controls |
Region | 6q24.3 |
Chromosome id | chr6 |
Chromosome position | 146597814 |
Reported gene | RAB32 |
Mapped gene | LOC101928661 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 101928661 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2275606-A |
SNPs | rs2275606 |
Merged | 0 |
SNP id current | 2275606 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.21 |
P value | 0.00000000000004 |
Pvalue mlog | 13.397940008672 |
P value text | |
Or beta | 1.3 |
%95 Ci | [1.21-1.39] |
Platform | NR [1701673] (imputed) |
CNV | N |
Mapped trait | leprosy |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001054 |
Study accession | GCST001292 |