SNP Detail For rs2275336
1.Mapping Information
Human SNP ID rs2275336
Human chromosome chr6
Human SNP position 154405854
Pig chromosome chr1
Pig SNP position 14450791
2.Annotation Information
PubMed ID22451204
JournalAnn Neurol
Linkwww.ncbi.nlm.nih.gov/pubmed/22451204
StudyMeta-analysis of Parkinson__s disease: identification of a novel locus, RIT2.
Disease/TraitParkinson__s disease
Initial sample4,238 European ancestry cases, 4,239 European ancestry controls
Replication sample3,738 European ancestry cases, 2,111 European ancestry controls
Region6q25.2
Chromosome idchr6
Chromosome position154405854
Reported geneCNKSR3
Mapped geneCNKSR3
Upstream gene id
Downstream gene id
SNP gene ids154043
Upstream gene distance
Downstream gene distance
SNP risk allelers2275336-?
SNPsrs2275336
Merged0
SNP id current2275336
Context3_prime_UTR_variant
Intergenic0
Allele frequencyNR
P value0.0000009
Pvalue mlog6.04575749056067
P value text
Or beta1.36
%95 Ci[NR]
PlatformIllumina [2500000] (imputed)
CNVN
Mapped traitParkinson__s disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002508
Study accessionGCST001430