Human SNP ID | rs2275215 |
---|---|
Human chromosome | chr6 |
Human SNP position | 129540247 |
Pig chromosome | chr1 |
Pig SNP position | 37183959 |
PubMed ID | 20397748 |
---|---|
Journal | Twin Res Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20397748 |
Study | Genome-wide association study of height and body mass index in Australian twin families. |
Disease/Trait | Body mass index |
Initial sample | 11,536 European ancestry individuals |
Replication sample | NA |
Region | 6q22.33 |
Chromosome id | chr6 |
Chromosome position | 129540247 |
Reported gene | LAMA2 |
Mapped gene | LOC102723409 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 102723409 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2275215-T |
SNPs | rs2275215 |
Merged | 0 |
SNP id current | 2275215 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.73 |
P value | 0.0000004 |
Pvalue mlog | 6.39794000867203 |
P value text | |
Or beta | 0.09 |
%95 Ci | [0.05-0.13] SD decrease |
Platform | Illumina [559712] (imputed) |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST000642 |