SNP Detail For rs2275215
1.Mapping Information
Human SNP ID rs2275215
Human chromosome chr6
Human SNP position 129540247
Pig chromosome chr1
Pig SNP position 37183959
2.Annotation Information
PubMed ID20397748
JournalTwin Res Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20397748
StudyGenome-wide association study of height and body mass index in Australian twin families.
Disease/TraitBody mass index
Initial sample11,536 European ancestry individuals
Replication sampleNA
Region6q22.33
Chromosome idchr6
Chromosome position129540247
Reported geneLAMA2
Mapped geneLOC102723409
Upstream gene id
Downstream gene id
SNP gene ids102723409
Upstream gene distance
Downstream gene distance
SNP risk allelers2275215-T
SNPsrs2275215
Merged0
SNP id current2275215
Contextintron_variant
Intergenic0
Allele frequency0.73
P value0.0000004
Pvalue mlog6.39794000867203
P value text
Or beta0.09
%95 Ci[0.05-0.13] SD decrease
PlatformIllumina [559712] (imputed)
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST000642