Human SNP ID | rs2273720 |
---|---|
Human chromosome | chr9 |
Human SNP position | 27209471 |
Pig chromosome | chr1 |
Pig SNP position | 218236891 |
PubMed ID | 25552591 |
---|---|
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25552591 |
Study | Genome-Wide Association Study for Endothelial Growth Factors. |
Disease/Trait | Endothelial growth factor levels |
Initial sample | up to 3,574 European ancestry individuals |
Replication sample | up to 3,184 European ancestry individuals |
Region | 9p21.2 |
Chromosome id | chr9 |
Chromosome position | 27209471 |
Reported gene | Tie-2 |
Mapped gene | TEK |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 7010 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2273720-C |
SNPs | rs2273720 |
Merged | 0 |
SNP id current | 2273720 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.056 |
P value | 2E-65 |
Pvalue mlog | 64.698970004336 |
P value text | (sTie-2) |
Or beta | 0.265 |
%95 Ci | [0.23-0.30] unit increase |
Platform | Affymetrix [~ 2500000] (imputed) |
CNV | N |
Mapped trait | endothelial growth factor measurement, angiopoietin-2 receptor measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006900, http://www.ebi.ac.uk/efo/EFO_0006902 |
Study accession | GCST002731 |