Human SNP ID | rs2273601 |
---|---|
Human chromosome | chr6 |
Human SNP position | 117409656 |
Pig chromosome | chr1 |
Pig SNP position | 49771246 |
PubMed ID | 23459443 |
---|---|
Journal | Pharmacogenomics J |
Link | www.ncbi.nlm.nih.gov/pubmed/23459443 |
Study | Drug-gene interactions and the search for missing heritability: a cross-sectional pharmacogenomics study of the QT interval. |
Disease/Trait | QT interval (interaction) |
Initial sample | 33,781 European ancestry individuals |
Replication sample | NA |
Region | 6q22.1 |
Chromosome id | chr6 |
Chromosome position | 117409656 |
Reported gene | ROS1 |
Mapped gene | ROS1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 6098 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2273601-A |
SNPs | rs2273601 |
Merged | 0 |
SNP id current | 2273601 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.23 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (UAZ Cert) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | QT interval |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004682 |
Study accession | GCST001890 |