Human SNP ID | rs2272651 |
---|---|
Human chromosome | chr8 |
Human SNP position | 133258305 |
Pig chromosome | chr4 |
Pig SNP position | 7916484 |
PubMed ID | 23726511 |
---|---|
Journal | Biol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/23726511 |
Study | Genome-wide association study identifies new susceptibility loci for posttraumatic stress disorder. |
Disease/Trait | Post-traumatic stress disorder (asjusted for relatedness) |
Initial sample | up to 308 European ancestry cases, up to 1,538 European ancestry controls, up to 456 African American cases, up to 2,936 African American controls |
Replication sample | NA |
Region | 8q24.22 |
Chromosome id | chr8 |
Chromosome position | 133258305 |
Reported gene | NDRG1 |
Mapped gene | NDRG1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 10397 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2272651-? |
SNPs | rs2272651 |
Merged | 0 |
SNP id current | 2272651 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (Whole cohort; EA) |
Or beta | |
%95 Ci | |
Platform | Illumina [up to 871502] |
CNV | N |
Mapped trait | post-traumatic stress disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001358 |
Study accession | GCST002037 |