Human SNP ID | rs2271749 |
---|---|
Human chromosome | chr4 |
Human SNP position | 16166331 |
Pig chromosome | chr8 |
Pig SNP position | 11021618 |
PubMed ID | 24665060 |
---|---|
Journal | J Med Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24665060 |
Study | Genome-wide association study of smoking behaviours among Bangladeshi adults. |
Disease/Trait | Smoking initiation |
Initial sample | 754 Bangladeshi ancestry never smoker males, 2,565 Bangladeshi ancestry never smoker females, 1,837 Bangladeshi ancestry ever smoker males, 198 Bangladeshi ancestry ever smoker females |
Replication sample | NA |
Region | 4p15.32 |
Chromosome id | chr4 |
Chromosome position | 16166331 |
Reported gene | NR |
Mapped gene | TAPT1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 202018 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2271749-? |
SNPs | rs2271749 |
Merged | 0 |
SNP id current | 2271749 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (females) |
Or beta | |
%95 Ci | |
Platform | Illumina [1211988] (imputed) |
CNV | N |
Mapped trait | smoking initiation |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005670 |
Study accession | GCST002396 |