SNP Detail For rs2269426
1.Mapping Information
Human SNP ID rs2269426
Human chromosome chr6
Human SNP position 32108722
Pig chromosome chr7
Pig SNP position 27976069
2.Annotation Information
PubMed ID19198610
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19198610
StudySequence variants affecting eosinophil numbers associate with asthma and myocardial infarction.
Disease/TraitEosinophil counts
Initial sample9,392 European ancestry individuals
Replication sample12,118 European ancestry individuals, 5,212 East Asian ancestry individuals
Region6p21.32
Chromosome idchr6
Chromosome position32108722
Reported geneMHC
Mapped geneTNXB
Upstream gene id
Downstream gene id
SNP gene ids7148
Upstream gene distance
Downstream gene distance
SNP risk allelers2269426-T
SNPsrs2269426
Merged0
SNP id current2269426
Contextintron_variant
Intergenic0
Allele frequency0.76
P value0.000003
Pvalue mlog5.52287874528033
P value text(EA)
Or beta4.6
%95 Ci[2.7-6.6] % standard unit increase
PlatformIllumina [312179]
CNVN
Mapped traiteosinophil count
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004842
Study accessionGCST000339