Human SNP ID | rs2269426 |
---|---|
Human chromosome | chr6 |
Human SNP position | 32108722 |
Pig chromosome | chr7 |
Pig SNP position | 27976069 |
PubMed ID | 19198610 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19198610 |
Study | Sequence variants affecting eosinophil numbers associate with asthma and myocardial infarction. |
Disease/Trait | Eosinophil counts |
Initial sample | 9,392 European ancestry individuals |
Replication sample | 12,118 European ancestry individuals, 5,212 East Asian ancestry individuals |
Region | 6p21.32 |
Chromosome id | chr6 |
Chromosome position | 32108722 |
Reported gene | MHC |
Mapped gene | TNXB |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 7148 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2269426-T |
SNPs | rs2269426 |
Merged | 0 |
SNP id current | 2269426 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.76 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (EA) |
Or beta | 4.6 |
%95 Ci | [2.7-6.6] % standard unit increase |
Platform | Illumina [312179] |
CNV | N |
Mapped trait | eosinophil count |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004842 |
Study accession | GCST000339 |