Human SNP ID | rs2269372 |
---|---|
Human chromosome | chrX |
Human SNP position | 153942092 |
Pig chromosome | chrX |
Pig SNP position | 142232379 |
PubMed ID | 24043878 |
---|---|
Journal | Schizophr Bull |
Link | www.ncbi.nlm.nih.gov/pubmed/24043878 |
Study | Common variants on Xq28 conferring risk of schizophrenia in Han Chinese. |
Disease/Trait | Schizophrenia |
Initial sample | 481 Han Chinese ancestry cases, 2,025 Han Chinese ancestry controls |
Replication sample | 1,088 Han Chinese ancestry cases, 1,063 Han Chinese ancestry controls |
Region | Xq28 |
Chromosome id | chrX |
Chromosome position | 153942092 |
Reported gene | RENBP, MECP2, ARHGAP4 |
Mapped gene | RENBP |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5973 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2269372-A |
SNPs | rs2269372 |
Merged | 0 |
SNP id current | 2269372 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.00000004 |
Pvalue mlog | 7.39794000867203 |
P value text | |
Or beta | 1.313 |
%95 Ci | [NR] |
Platform | Illumina [2383054] (imputed) |
CNV | N |
Mapped trait | schizophrenia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000692 |
Study accession | GCST002190 |