SNP Detail For rs2268118
1.Mapping Information
Human SNP ID rs2268118
Human chromosome chr12
Human SNP position 13719110
Pig chromosome chr5
Pig SNP position 62105231
2.Annotation Information
PubMed ID22610502
JournalHum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22610502
StudyGenome-wide analysis of polymorphisms associated with cytokine responses in smallpox vaccine recipients.
Disease/TraitImmune reponse to smallpox (secreted IL-2)
Initial sampleUp to 512 European ancestry individuals, up to 199 African American individuals
Replication sampleNA
Region12p13.1
Chromosome idchr12
Chromosome position13719110
Reported geneGRIN2B
Mapped geneGRIN2B
Upstream gene id
Downstream gene id
SNP gene ids2904
Upstream gene distance
Downstream gene distance
SNP risk allelers2268118-A
SNPsrs2268118
Merged0
SNP id current2268118
Contextintron_variant
Intergenic0
Allele frequency
P value0.00000001
Pvalue mlog8
P value text(EA)
Or beta
%95 Ci
PlatformIllumina [NR]
CNVN
Mapped traitresponse to vaccine, cytokine measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004645, http://www.ebi.ac.uk/efo/EFO_0004873
Study accessionGCST001535