Human SNP ID | rs2267739 |
---|---|
Human chromosome | chr7 |
Human SNP position | 31097283 |
Pig chromosome | chr18 |
Pig SNP position | 46241887 |
PubMed ID | 25147783 |
---|---|
Journal | Front Public Health |
Link | www.ncbi.nlm.nih.gov/pubmed/25147783 |
Study | Genetic Associations with Plasma B12, B6, and Folate Levels in an Ischemic Stroke Population from the Vitamin Intervention for Stroke Prevention (VISP) Trial. |
Disease/Trait | Vitamin B levels in ischemic stroke |
Initial sample | 1,725 European ancestry cases, 258 African ancestry cases, 117 cases |
Replication sample | NA |
Region | 7p14.3 |
Chromosome id | chr7 |
Chromosome position | 31097283 |
Reported gene | ADCYAP1R1 |
Mapped gene | ADCYAP1R1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 117 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2267739-G |
SNPs | rs2267739 |
Merged | 0 |
SNP id current | 2267739 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.153 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | (Vitamin B6) |
Or beta | 0.241 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [737081] |
CNV | N |
Mapped trait | vitamin B6 measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004621 |
Study accession | GCST002559 |