SNP Detail For rs2267739
1.Mapping Information
Human SNP ID rs2267739
Human chromosome chr7
Human SNP position 31097283
Pig chromosome chr18
Pig SNP position 46241887
2.Annotation Information
PubMed ID25147783
JournalFront Public Health
Linkwww.ncbi.nlm.nih.gov/pubmed/25147783
StudyGenetic Associations with Plasma B12, B6, and Folate Levels in an Ischemic Stroke Population from the Vitamin Intervention for Stroke Prevention (VISP) Trial.
Disease/TraitVitamin B levels in ischemic stroke
Initial sample1,725 European ancestry cases, 258 African ancestry cases, 117 cases
Replication sampleNA
Region7p14.3
Chromosome idchr7
Chromosome position31097283
Reported geneADCYAP1R1
Mapped geneADCYAP1R1
Upstream gene id
Downstream gene id
SNP gene ids117
Upstream gene distance
Downstream gene distance
SNP risk allelers2267739-G
SNPsrs2267739
Merged0
SNP id current2267739
Contextintron_variant
Intergenic0
Allele frequency0.153
P value0.000001
Pvalue mlog6
P value text(Vitamin B6)
Or beta0.241
%95 Ci[NR] unit decrease
PlatformIllumina [737081]
CNVN
Mapped traitvitamin B6 measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004621
Study accessionGCST002559