SNP Detail For rs2267193
1.Mapping Information
Human SNP ID rs2267193
Human chromosome chr22
Human SNP position 33350540
Pig chromosome chr5
Pig SNP position 110279741
2.Annotation Information
PubMed ID22589738
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22589738
StudyGenome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.
Disease/TraitVisceral fat
Initial sample5,560 European ancestry female individuals, 4,997 European ancestry male individuals
Replication sampleNA
Region22q12.3
Chromosome idchr22
Chromosome position33350540
Reported geneLARGE
Mapped geneLARGE
Upstream gene id
Downstream gene id
SNP gene ids9215
Upstream gene distance
Downstream gene distance
SNP risk allelers2267193-C
SNPsrs2267193
Merged0
SNP id current2267193
Contextintron_variant
Intergenic0
Allele frequency0.28
P value0.000008
Pvalue mlog5.09691001300805
P value text(overall)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [2500000] (imputed)
CNVN
Mapped traitvisceral adipose tissue measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004765
Study accessionGCST001525