SNP Detail For rs2267138
1.Mapping Information
Human SNP ID rs2267138
Human chromosome chr22
Human SNP position 29397652
Pig chromosome chr14
Pig SNP position 49496148
2.Annotation Information
PubMed ID23049088
JournalInvest Ophthalmol Vis Sci
Linkwww.ncbi.nlm.nih.gov/pubmed/23049088
StudyA genome-wide association study provides evidence for association of chromosome 8p23 (MYP10) and 10q21.1 (MYP15) with high myopia in the French Population.
Disease/TraitMyopia (pathological)
Initial sample187 European ancestry cases, 1064 European ancestry controls
Replication sample
Region22q12.2
Chromosome idchr22
Chromosome position29397652
Reported geneintergenic
Mapped geneLOC105372987, LOC105377195
Upstream gene id
Downstream gene id
SNP gene ids105372987, 105377195
Upstream gene distance
Downstream gene distance
SNP risk allelers2267138-?
SNPsrs2267138
Merged0
SNP id current2267138
Contextintron_variant
Intergenic0
Allele frequency0.131
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta
%95 Ci[NR]
PlatformAffymetrix, Illumina [152234]
CNVN
Mapped traitpathological myopia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004207
Study accessionGCST001712