Human SNP ID | rs225190 |
---|---|
Human chromosome | chr17 |
Human SNP position | 32550640 |
Pig chromosome | chr12 |
Pig SNP position | 44186398 |
PubMed ID | 20686608 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/20686608 |
Study | Genome-wide association study of pancreatic cancer in Japanese population. |
Disease/Trait | Pancreatic cancer |
Initial sample | 991 Japanese ancestry cases, 5,209 Japanese ancestry controls |
Replication sample | NA |
Region | 17q11.2 |
Chromosome id | chr17 |
Chromosome position | 32550640 |
Reported gene | MYO1D |
Mapped gene | MYO1D |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 4642 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs225190-G |
SNPs | rs225190 |
Merged | 0 |
SNP id current | 225190 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.36 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | (allelic) |
Or beta | 1.26 |
%95 Ci | [1.14-1.39] |
Platform | Illumina [420236] |
CNV | N |
Mapped trait | pancreatic carcinoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002618 |
Study accession | GCST000745 |