SNP Detail For rs2251830
1.Mapping Information
Human SNP ID rs2251830
Human chromosome chr6
Human SNP position 31049201
Pig chromosome chr7
Pig SNP position 27356875
2.Annotation Information
PubMed ID25429064
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25429064
StudyMeta-analysis of genome-wide association studies of adult height in East Asians identifies 17 novel loci.
Disease/TraitHeight
Initial sample36,227 East Asian ancestry individuals
Replication sample57,699 East Asian ancestry individuals
Region6p21.33
Chromosome idchr6
Chromosome position31049201
Reported geneHCG22
Mapped geneMUC22 - HCG22
Upstream gene id100507679
Downstream gene id285834
SNP gene ids
Upstream gene distance13631
Downstream gene distance4249
SNP risk allelers2251830-A
SNPsrs2251830
Merged0
SNP id current2251830
Contextupstream_gene_variant
Intergenic1
Allele frequency0.36
P value5E-22
Pvalue mlog21.3010299956639
P value text
Or beta0.053
%95 Ci[0.041-0.065] unit increase
PlatformAffymetrix, Illumina [2704730] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST002702