SNP Detail For rs2245641
1.Mapping Information
Human SNP ID rs2245641
Human chromosome chr9
Human SNP position 15309930
Pig chromosome chr1
Pig SNP position 231356734
2.Annotation Information
PubMed ID22925353
JournalJ Affect Disord
Linkwww.ncbi.nlm.nih.gov/pubmed/22925353
StudyA genome-wide association study of seasonal pattern mania identifies NF1A as a possible susceptibility gene for bipolar disorder.
Disease/TraitBipolar disorder
Initial sample2,191 European ancestry cases, 1,434 European ancestry controls
Replication sampleNA
Region9p22.3
Chromosome idchr9
Chromosome position15309930
Reported geneTTC39B
Mapped geneTTC39B - RPL7P33
Upstream gene id158219
Downstream gene id286348
SNP gene ids
Upstream gene distance2570
Downstream gene distance51444
SNP risk allelers2245641-?
SNPsrs2245641
Merged0
SNP id current2245641
Contextupstream_gene_variant
Intergenic1
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text(SM vs. Control)
Or beta1.896
%95 Ci[NR]
PlatformAffymetrix [703012]
CNVN
Mapped traitbipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST001647