Human SNP ID | rs2245641 |
---|---|
Human chromosome | chr9 |
Human SNP position | 15309930 |
Pig chromosome | chr1 |
Pig SNP position | 231356734 |
PubMed ID | 22925353 |
---|---|
Journal | J Affect Disord |
Link | www.ncbi.nlm.nih.gov/pubmed/22925353 |
Study | A genome-wide association study of seasonal pattern mania identifies NF1A as a possible susceptibility gene for bipolar disorder. |
Disease/Trait | Bipolar disorder |
Initial sample | 2,191 European ancestry cases, 1,434 European ancestry controls |
Replication sample | NA |
Region | 9p22.3 |
Chromosome id | chr9 |
Chromosome position | 15309930 |
Reported gene | TTC39B |
Mapped gene | TTC39B - RPL7P33 |
Upstream gene id | 158219 |
Downstream gene id | 286348 |
SNP gene ids | |
Upstream gene distance | 2570 |
Downstream gene distance | 51444 |
SNP risk allele | rs2245641-? |
SNPs | rs2245641 |
Merged | 0 |
SNP id current | 2245641 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (SM vs. Control) |
Or beta | 1.896 |
%95 Ci | [NR] |
Platform | Affymetrix [703012] |
CNV | N |
Mapped trait | bipolar disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000289 |
Study accession | GCST001647 |