SNP Detail For rs224278
1.Mapping Information
Human SNP ID rs224278
Human chromosome chr10
Human SNP position 62820815
Pig chromosome chr14
Pig SNP position 71526384
2.Annotation Information
PubMed ID22327514
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22327514
StudyCommon variants near TARDBP and EGR2 are associated with susceptibility to Ewing sarcoma.
Disease/TraitEwing sarcoma
Initial sampleUp to 427 European ancestry cases, up to 4,352 European ancestry controls
Replication sample661 European ancestry cases, 1,299 European ancestry controls
Region10q21.3
Chromosome idchr10
Chromosome position62820815
Reported geneEGR2, ADO, ZNF365
Mapped geneEGR2
Upstream gene id
Downstream gene id
SNP gene ids1959
Upstream gene distance
Downstream gene distance
SNP risk allelers224278-C
SNPsrs224278
Merged0
SNP id current224278
Contextintron_variant
Intergenic0
Allele frequency0.58
P value0.00000000000000004
Pvalue mlog16.397940008672
P value text
Or beta1.66
%95 Ci[1.42-1.93]
PlatformNR [286966]
CNVN
Mapped traitEwing sarcoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000174
Study accessionGCST001407