Human SNP ID | rs2239557 |
---|---|
Human chromosome | chr14 |
Human SNP position | 74085267 |
Pig chromosome | chr7 |
Pig SNP position | 103137170 |
PubMed ID | 20585627 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20585627 |
Study | Web-based, participant-driven studies yield novel genetic associations for common traits. |
Disease/Trait | Common traits (Other) |
Initial sample | 9,126 European ancestry individuals |
Replication sample | NA |
Region | 14q24.3 |
Chromosome id | chr14 |
Chromosome position | 74085267 |
Reported gene | NR |
Mapped gene | LIN52 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 91750 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2239557-? |
SNPs | rs2239557 |
Merged | 0 |
SNP id current | 2239557 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000003 |
Pvalue mlog | 6.52287874528033 |
P value text | (morningness) |
Or beta | |
%95 Ci | |
Platform | Illumina [535076] |
CNV | N |
Mapped trait | circadian rhythm |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004354 |
Study accession | GCST000706 |