Human SNP ID | rs2236267 |
---|---|
Human chromosome | chr14 |
Human SNP position | 88165977 |
Pig chromosome | chr7 |
Pig SNP position | 116605220 |
PubMed ID | 24962563 |
---|---|
Journal | Genet Epidemiol |
Link | www.ncbi.nlm.nih.gov/pubmed/24962563 |
Study | Genome-wide genetic and transcriptomic investigation of variation in antibody response to dietary antigens. |
Disease/Trait | Food antigen IgG levels |
Initial sample | 1,367 Mexican Americans from 63 families |
Replication sample | NA |
Region | 14q31.3 |
Chromosome id | chr14 |
Chromosome position | 88165977 |
Reported gene | KCNK10 |
Mapped gene | LOC105370612 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105370612 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2236267-C |
SNPs | rs2236267 |
Merged | 0 |
SNP id current | 2236267 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | 0.462 |
P value | 0.0000004 |
Pvalue mlog | 6.39794000867203 |
P value text | (BSA-b) |
Or beta | 0.2 |
%95 Ci | [NR] unit increase |
Platform | Illumina [944565] (imputed) |
CNV | N |
Mapped trait | serum IgG measurement, response to dietary antigen |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004565, http://www.ebi.ac.uk/efo/EFO_0005844 |
Study accession | GCST002518 |