SNP Detail For rs2236267
1.Mapping Information
Human SNP ID rs2236267
Human chromosome chr14
Human SNP position 88165977
Pig chromosome chr7
Pig SNP position 116605220
2.Annotation Information
PubMed ID24962563
JournalGenet Epidemiol
Linkwww.ncbi.nlm.nih.gov/pubmed/24962563
StudyGenome-wide genetic and transcriptomic investigation of variation in antibody response to dietary antigens.
Disease/TraitFood antigen IgG levels
Initial sample1,367 Mexican Americans from 63 families
Replication sampleNA
Region14q31.3
Chromosome idchr14
Chromosome position88165977
Reported geneKCNK10
Mapped geneLOC105370612
Upstream gene id
Downstream gene id
SNP gene ids105370612
Upstream gene distance
Downstream gene distance
SNP risk allelers2236267-C
SNPsrs2236267
Merged0
SNP id current2236267
Contextintergenic_variant
Intergenic0
Allele frequency0.462
P value0.0000004
Pvalue mlog6.39794000867203
P value text(BSA-b)
Or beta0.2
%95 Ci[NR] unit increase
PlatformIllumina [944565] (imputed)
CNVN
Mapped traitserum IgG measurement, response to dietary antigen
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004565, http://www.ebi.ac.uk/efo/EFO_0005844
Study accessionGCST002518