Human SNP ID | rs2235682 |
---|---|
Human chromosome | chr22 |
Human SNP position | 36587381 |
Pig chromosome | chr5 |
Pig SNP position | 8848236 |
PubMed ID | 25514360 |
---|---|
Journal | Am J Respir Cell Mol Biol |
Link | www.ncbi.nlm.nih.gov/pubmed/25514360 |
Study | Genome Wide Association Study Identifies Novel Loci Associated with Airway Responsiveness in COPD. |
Disease/Trait | Airway responsiveness in chronic obstructive pulmonary disease |
Initial sample | Up to 4,108 European American cases |
Replication sample | NA |
Region | 22q12.3 |
Chromosome id | chr22 |
Chromosome position | 36587381 |
Reported gene | CACNG2 |
Mapped gene | CACNG2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 10369 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2235682-A |
SNPs | rs2235682 |
Merged | 0 |
SNP id current | 2235682 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.274 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (Dichotomous PC20) |
Or beta | 1.28 |
%95 Ci | [NR] |
Platform | Illumina [546355] |
CNV | N |
Mapped trait | airway responsiveness measurement, chronic obstructive pulmonary disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006897, http://www.ebi.ac.uk/efo/EFO_0000341 |
Study accession | GCST002724 |