Human SNP ID | rs2235302 |
---|---|
Human chromosome | chr1 |
Human SNP position | 169611052 |
Pig chromosome | chr4 |
Pig SNP position | 89010633 |
PubMed ID | 20167578 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20167578 |
Study | Large-scale genomic studies reveal central role of ABO in sP-selectin and sICAM-1 levels. |
Disease/Trait | Soluble levels of adhesion molecules |
Initial sample | Up to 9,813 European ancestry individuals |
Replication sample | NA |
Region | 1q24.2 |
Chromosome id | chr1 |
Chromosome position | 169611052 |
Reported gene | SELP |
Mapped gene | SELP |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 6403 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2235302-T |
SNPs | rs2235302 |
Merged | 0 |
SNP id current | 2235302 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000000000000004 |
Pvalue mlog | 15.397940008672 |
P value text | (P-Selectin) |
Or beta | 7.3 |
%95 Ci | [5.54-9.06] % decrease |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | soluble P-selectin measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004519 |
Study accession | GCST000599 |