SNP Detail For rs2233956
1.Mapping Information
Human SNP ID rs2233956
Human chromosome chr6
Human SNP position 31113428
Pig chromosome chr7
Pig SNP position 27315711
2.Annotation Information
PubMed ID21323541
JournalN Engl J Med
Linkwww.ncbi.nlm.nih.gov/pubmed/21323541
StudyRisk HLA-DQA1 and PLA(2)R1 alleles in idiopathic membranous nephropathy.
Disease/TraitIdiopathic membranous nephropathy
Initial sample556 European ancestry cases, 2,338 European ancestry controls
Replication sampleNA
Region6p21.33
Chromosome idchr6
Chromosome position31113428
Reported geneintergenic
Mapped geneC6orf15 - PSORS1C1
Upstream gene id29113
Downstream gene id170679
SNP gene ids
Upstream gene distance873
Downstream gene distance1403
SNP risk allelers2233956-G
SNPsrs2233956
Merged0
SNP id current2233956
Contextupstream_gene_variant
Intergenic1
Allele frequency0.1813
P value6E-48
Pvalue mlog47.2218487496163
P value text
Or beta2.77
%95 Ci[NR]
PlatformIllumina [242824]
CNVN
Mapped traitmembranous glomerulonephritis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004254
Study accessionGCST000984