Human SNP ID | rs2233956 |
---|---|
Human chromosome | chr6 |
Human SNP position | 31113428 |
Pig chromosome | chr7 |
Pig SNP position | 27315711 |
PubMed ID | 21323541 |
---|---|
Journal | N Engl J Med |
Link | www.ncbi.nlm.nih.gov/pubmed/21323541 |
Study | Risk HLA-DQA1 and PLA(2)R1 alleles in idiopathic membranous nephropathy. |
Disease/Trait | Idiopathic membranous nephropathy |
Initial sample | 556 European ancestry cases, 2,338 European ancestry controls |
Replication sample | NA |
Region | 6p21.33 |
Chromosome id | chr6 |
Chromosome position | 31113428 |
Reported gene | intergenic |
Mapped gene | C6orf15 - PSORS1C1 |
Upstream gene id | 29113 |
Downstream gene id | 170679 |
SNP gene ids | |
Upstream gene distance | 873 |
Downstream gene distance | 1403 |
SNP risk allele | rs2233956-G |
SNPs | rs2233956 |
Merged | 0 |
SNP id current | 2233956 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.1813 |
P value | 6E-48 |
Pvalue mlog | 47.2218487496163 |
P value text | |
Or beta | 2.77 |
%95 Ci | [NR] |
Platform | Illumina [242824] |
CNV | N |
Mapped trait | membranous glomerulonephritis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004254 |
Study accession | GCST000984 |