Human SNP ID | rs2233152 |
---|---|
Human chromosome | chr19 |
Human SNP position | 40775111 |
Pig chromosome | chr6 |
Pig SNP position | 44671154 |
PubMed ID | 22446962 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22446962 |
Study | A genome-wide association study identifies three new risk loci for Kawasaki disease. |
Disease/Trait | Kawasaki disease |
Initial sample | 428 Japanese ancestry cases, 3,379 Japanese ancestry controls |
Replication sample | 754 Japanese ancestry cases, 947 Japanese ancestry controls |
Region | 19q13.2 |
Chromosome id | chr19 |
Chromosome position | 40775111 |
Reported gene | NUMBL, MIA |
Mapped gene | SNRPA - MIA |
Upstream gene id | 6626 |
Downstream gene id | 8190 |
SNP gene ids | |
Upstream gene distance | 9719 |
Downstream gene distance | 66 |
SNP risk allele | rs2233152-A |
SNPs | rs2233152 |
Merged | 0 |
SNP id current | 2233152 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.158 |
P value | 0.0000000004 |
Pvalue mlog | 9.39794000867203 |
P value text | |
Or beta | 1.52 |
%95 Ci | [1.28-1.81] |
Platform | Illumina [463793] |
CNV | N |
Mapped trait | mucocutaneous lymph node syndrome |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004246 |
Study accession | GCST001455 |