SNP Detail For rs2233152
1.Mapping Information
Human SNP ID rs2233152
Human chromosome chr19
Human SNP position 40775111
Pig chromosome chr6
Pig SNP position 44671154
2.Annotation Information
PubMed ID22446962
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22446962
StudyA genome-wide association study identifies three new risk loci for Kawasaki disease.
Disease/TraitKawasaki disease
Initial sample428 Japanese ancestry cases, 3,379 Japanese ancestry controls
Replication sample754 Japanese ancestry cases, 947 Japanese ancestry controls
Region19q13.2
Chromosome idchr19
Chromosome position40775111
Reported geneNUMBL, MIA
Mapped geneSNRPA - MIA
Upstream gene id6626
Downstream gene id8190
SNP gene ids
Upstream gene distance9719
Downstream gene distance66
SNP risk allelers2233152-A
SNPsrs2233152
Merged0
SNP id current2233152
Contextintron_variant
Intergenic1
Allele frequency0.158
P value0.0000000004
Pvalue mlog9.39794000867203
P value text
Or beta1.52
%95 Ci[1.28-1.81]
PlatformIllumina [463793]
CNVN
Mapped traitmucocutaneous lymph node syndrome
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004246
Study accessionGCST001455