SNP Detail For rs2219089
1.Mapping Information
Human SNP ID rs2219089
Human chromosome chr2
Human SNP position 122473221
Pig chromosome chr15
Pig SNP position 33783771
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region2q14.3
Chromosome idchr2
Chromosome position122473221
Reported geneNR
Mapped geneLOC105373592 - LOC105373593
Upstream gene id105373592
Downstream gene id105373593
SNP gene ids
Upstream gene distance40342
Downstream gene distance18153
SNP risk allelers2219089-T
SNPsrs2219089
Merged
SNP id current2219089
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta1.0526316
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048