SNP Detail For rs2218565
1.Mapping Information
Human SNP ID rs2218565
Human chromosome chr11
Human SNP position 36314713
Pig chromosome chr2
Pig SNP position 27089940
2.Annotation Information
PubMed ID25574825
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25574825
StudyGenome-wide Comparative Analysis of Atopic Dermatitis and Psoriasis Gives Insight into Opposing Genetic Mechanisms.
Disease/TraitInflammatory skin disease
Initial sample2,079 European ancestry atopic dermatitis cases, 4,212 European ancestry psoriasis cases, 11,899 European ancestry controls
Replication sampleNA
Region11p13
Chromosome idchr11
Chromosome position36314713
Reported genePRR5L
Mapped genePRR5L
Upstream gene id
Downstream gene id
SNP gene ids79899
Upstream gene distance
Downstream gene distance
SNP risk allelers2218565-?
SNPsrs2218565
Merged0
SNP id current2218565
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text(Shared)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [~ 5200000]
CNVN
Mapped traitatopic eczema, psoriasis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000274, http://www.ebi.ac.uk/efo/EFO_0000676
Study accessionGCST002740