SNP Detail For rs2216405
1.Mapping Information
Human SNP ID rs2216405
Human chromosome chr2
Human SNP position 210752170
Pig chromosome chr15
Pig SNP position 125348274
2.Annotation Information
PubMed ID21886157
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/21886157
StudyHuman metabolic individuality in biomedical and pharmaceutical research.
Disease/TraitMetabolic traits
Initial sample2,820 European ancestry individuals
Replication sampleNA
Region2q34
Chromosome idchr2
Chromosome position210752170
Reported geneCPS1
Mapped geneCPS1 - RPS27P10
Upstream gene id1373
Downstream gene id646233
SNP gene ids
Upstream gene distance73063
Downstream gene distance546708
SNP risk allelers2216405-G
SNPsrs2216405
Merged0
SNP id current2216405
Contextintergenic_variant
Intergenic1
Allele frequency0.177
P value2E-27
Pvalue mlog26.698970004336
P value text(glycine + 17 other traits)
Or beta0.117
%95 Ci[NR] unit increase
PlatformAffymetrix, Illumina [534665]
CNVN
Mapped traitmetabolite measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004725
Study accessionGCST001217