Human SNP ID | rs2216405 |
---|---|
Human chromosome | chr2 |
Human SNP position | 210752170 |
Pig chromosome | chr15 |
Pig SNP position | 125348274 |
PubMed ID | 21886157 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/21886157 |
Study | Human metabolic individuality in biomedical and pharmaceutical research. |
Disease/Trait | Metabolic traits |
Initial sample | 2,820 European ancestry individuals |
Replication sample | NA |
Region | 2q34 |
Chromosome id | chr2 |
Chromosome position | 210752170 |
Reported gene | CPS1 |
Mapped gene | CPS1 - RPS27P10 |
Upstream gene id | 1373 |
Downstream gene id | 646233 |
SNP gene ids | |
Upstream gene distance | 73063 |
Downstream gene distance | 546708 |
SNP risk allele | rs2216405-G |
SNPs | rs2216405 |
Merged | 0 |
SNP id current | 2216405 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.177 |
P value | 2E-27 |
Pvalue mlog | 26.698970004336 |
P value text | (glycine + 17 other traits) |
Or beta | 0.117 |
%95 Ci | [NR] unit increase |
Platform | Affymetrix, Illumina [534665] |
CNV | N |
Mapped trait | metabolite measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004725 |
Study accession | GCST001217 |