SNP Detail For rs2206405
1.Mapping Information
Human SNP ID rs2206405
Human chromosome chr20
Human SNP position 7658302
Pig chromosome chr17
Pig SNP position 18511098
2.Annotation Information
PubMed ID26584805
JournalGenes Nutr
Linkwww.ncbi.nlm.nih.gov/pubmed/26584805
StudyA genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population.
Disease/TraitPlasma omega-6 polyunsaturated fatty acid levels (gamma-linolenic acid)
Initial sample717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls
Replication sampleNA
Region20p12.3
Chromosome idchr20
Chromosome position7658302
Reported geneNR
Mapped geneMIR8062 - LOC105372518
Upstream gene id102465865
Downstream gene id105372518
SNP gene ids
Upstream gene distance286610
Downstream gene distance40051
SNP risk allelers2206405-T
SNPsrs2206405
Merged
SNP id current2206405
Contextintergenic_variant
Intergenic1
Allele frequency0.7535
P value0.000001
Pvalue mlog6
P value text
Or beta0.1241
%95 Ci[0.074-0.174] unit increase
PlatformIllumina [up to 1980188] (imputed)
CNVN
Mapped trait
Mapped trait URI
Study accessionGCST003238