Human SNP ID | rs2206030 |
---|---|
Human chromosome | chr6 |
Human SNP position | 35436577 |
Pig chromosome | chr7 |
Pig SNP position | 36139158 |
PubMed ID | 23284291 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23284291 |
Study | Genome-wide joint meta-analysis of SNP and SNP-by-smoking interaction identifies novel loci for pulmonary function. |
Disease/Trait | Pulmonary function (interaction) |
Initial sample | 50,047 European ancestry individuals |
Replication sample | NA |
Region | 6p21.31 |
Chromosome id | chr6 |
Chromosome position | 35436577 |
Reported gene | PPARD, FANCE |
Mapped gene | PPARD - FANCE |
Upstream gene id | 5467 |
Downstream gene id | 2178 |
SNP gene ids | |
Upstream gene distance | 8386 |
Downstream gene distance | 15762 |
SNP risk allele | rs2206030-T |
SNPs | rs2206030 |
Merged | 0 |
SNP id current | 2206030 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.0000005 |
Pvalue mlog | 6.30102999566398 |
P value text | (FEV1/FVC, Ever-smoking) |
Or beta | |
%95 Ci | |
Platform | NR [~ 2500000] (imputed) |
CNV | N |
Mapped trait | FEV/FEC ratio |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004713 |
Study accession | GCST001784 |