SNP Detail For rs2206030
1.Mapping Information
Human SNP ID rs2206030
Human chromosome chr6
Human SNP position 35436577
Pig chromosome chr7
Pig SNP position 36139158
2.Annotation Information
PubMed ID23284291
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23284291
StudyGenome-wide joint meta-analysis of SNP and SNP-by-smoking interaction identifies novel loci for pulmonary function.
Disease/TraitPulmonary function (interaction)
Initial sample50,047 European ancestry individuals
Replication sampleNA
Region6p21.31
Chromosome idchr6
Chromosome position35436577
Reported genePPARD, FANCE
Mapped genePPARD - FANCE
Upstream gene id5467
Downstream gene id2178
SNP gene ids
Upstream gene distance8386
Downstream gene distance15762
SNP risk allelers2206030-T
SNPsrs2206030
Merged0
SNP id current2206030
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.0000005
Pvalue mlog6.30102999566398
P value text(FEV1/FVC, Ever-smoking)
Or beta
%95 Ci
PlatformNR [~ 2500000] (imputed)
CNVN
Mapped traitFEV/FEC ratio
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST001784