Human SNP ID | rs220262 |
---|---|
Human chromosome | chr21 |
Human SNP position | 42061937 |
Pig chromosome | chr13 |
Pig SNP position | 215754377 |
PubMed ID | 25839716 |
---|---|
Journal | Environ Res |
Link | www.ncbi.nlm.nih.gov/pubmed/25839716 |
Study | Genome-wide association study of plasma levels of polychlorinated biphenyls disclose an association with the CYP2B6 gene in a population-based sample. |
Disease/Trait | Polychlorinated biphenyl levels |
Initial sample | 922 European ancestry individuals |
Replication sample | NA |
Region | 21q22.3 |
Chromosome id | chr21 |
Chromosome position | 42061937 |
Reported gene | NR |
Mapped gene | UMODL1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 89766 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs220262-? |
SNPs | rs220262 |
Merged | 0 |
SNP id current | 220262 |
Context | upstream_gene_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.0000006 |
Pvalue mlog | 6.22184874961635 |
P value text | (PCB157) |
Or beta | 0.22 |
%95 Ci | [0.14-0.3] unit decrease |
Platform | Illumina [8736858] (imputed) |
CNV | N |
Mapped trait | polychlorinated biphenyls measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007042 |
Study accession | GCST002839 |