SNP Detail For rs220262
1.Mapping Information
Human SNP ID rs220262
Human chromosome chr21
Human SNP position 42061937
Pig chromosome chr13
Pig SNP position 215754377
2.Annotation Information
PubMed ID25839716
JournalEnviron Res
Linkwww.ncbi.nlm.nih.gov/pubmed/25839716
StudyGenome-wide association study of plasma levels of polychlorinated biphenyls disclose an association with the CYP2B6 gene in a population-based sample.
Disease/TraitPolychlorinated biphenyl levels
Initial sample922 European ancestry individuals
Replication sampleNA
Region21q22.3
Chromosome idchr21
Chromosome position42061937
Reported geneNR
Mapped geneUMODL1
Upstream gene id
Downstream gene id
SNP gene ids89766
Upstream gene distance
Downstream gene distance
SNP risk allelers220262-?
SNPsrs220262
Merged0
SNP id current220262
Contextupstream_gene_variant
Intergenic0
Allele frequency
P value0.0000006
Pvalue mlog6.22184874961635
P value text(PCB157)
Or beta0.22
%95 Ci[0.14-0.3] unit decrease
PlatformIllumina [8736858] (imputed)
CNVN
Mapped traitpolychlorinated biphenyls measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007042
Study accessionGCST002839