SNP Detail For rs2187375
1.Mapping Information
Human SNP ID rs2187375
Human chromosome chr18
Human SNP position 49645913
Pig chromosome chr1
Pig SNP position 108717290
2.Annotation Information
PubMed ID24816252
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24816252
StudyAn atlas of genetic influences on human blood metabolites.
Disease/TraitBlood metabolite levels
Initial sample7,824 European ancestry individuals
Replication sampleNA
Region18q21.1
Chromosome idchr18
Chromosome position49645913
Reported geneLIPG
Mapped geneLOC105372112
Upstream gene id
Downstream gene id
SNP gene ids105372112
Upstream gene distance
Downstream gene distance
SNP risk allelers2187375-A
SNPsrs2187375
Merged0
SNP id current2187375
Contextupstream_gene_variant
Intergenic0
Allele frequency0.17
P value0.00000000000000003
Pvalue mlog16.5228787452803
P value text(X-03094)
Or beta0.022
%95 Ci[0.016-0.028] unit decrease
PlatformAffymetrix, Illumina [2100000] (imputed)
CNVN
Mapped traitblood metabolite measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005664
Study accessionGCST002443