SNP Detail For rs2173763
1.Mapping Information
Human SNP ID rs2173763
Human chromosome chr3
Human SNP position 122610313
Pig chromosome chr13
Pig SNP position 147532848
2.Annotation Information
PubMed ID22472876
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/22472876
StudyA mega-analysis of genome-wide association studies for major depressive disorder.
Disease/TraitMajor depressive disorder
Initial sample9,240 European ancestry cases, 9,519 European ancestry controls
Replication sample6,783 European ancestry cases, 50,695 European ancestry controls
Region3q21.1
Chromosome idchr3
Chromosome position122610313
Reported genePARP9, DTX3L, PARP15
Mapped genePARP15
Upstream gene id
Downstream gene id
SNP gene ids165631
Upstream gene distance
Downstream gene distance
SNP risk allelers2173763-?
SNPsrs2173763
Merged0
SNP id current2173763
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta
%95 Ci
PlatformAffymetrix, Illumina, Perlegen [~ 1200000] (imputed)
CNVN
Mapped traitunipolar depression
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003761
Study accessionGCST001469