SNP Detail For rs2168889
1.Mapping Information
Human SNP ID rs2168889
Human chromosome chr4
Human SNP position 74357994
Pig chromosome chr8
Pig SNP position 74495243
2.Annotation Information
PubMed ID22916037
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22916037
StudyNovel Loci for metabolic networks and multi-tissue expression studies reveal genes for atherosclerosis.
Disease/TraitMetabolite levels
Initial sample6,608 European ancestry individuals
Replication sampleNA
Region4q13.3
Chromosome idchr4
Chromosome position74357994
Reported geneEREG
Mapped geneLOC105377276 - EREG
Upstream gene id105377276
Downstream gene id2069
SNP gene ids
Upstream gene distance27678
Downstream gene distance7149
SNP risk allelers2168889-?
SNPsrs2168889
Merged0
SNP id current2168889
Contextintergenic_variant
Intergenic1
Allele frequency0.05
P value0.00000000000006
Pvalue mlog13.2218487496163
P value text
Or beta
%95 Ci
PlatformIllumina [~ 2000000] (imputed)
CNVN
Mapped traitcoronary artery calcification
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004723
Study accessionGCST001639