Human SNP ID | rs2165953 |
---|---|
Human chromosome | chr10 |
Human SNP position | 4674350 |
Pig chromosome | chr10 |
Pig SNP position | 72234229 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 10p15.1 |
Chromosome id | chr10 |
Chromosome position | 4674350 |
Reported gene | LOC338588 |
Mapped gene | LOC105376373, LINC00704 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105376373, 100216001 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2165953-G |
SNPs | rs2165953 |
Merged | 0 |
SNP id current | 2165953 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.153 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (Sedentary activity ) |
Or beta | 0.02 |
%95 Ci | [NR] min/d increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | physical activity |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003940 |
Study accession | GCST001762 |