SNP Detail For rs2165953
1.Mapping Information
Human SNP ID rs2165953
Human chromosome chr10
Human SNP position 4674350
Pig chromosome chr10
Pig SNP position 72234229
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region10p15.1
Chromosome idchr10
Chromosome position4674350
Reported geneLOC338588
Mapped geneLOC105376373, LINC00704
Upstream gene id
Downstream gene id
SNP gene ids105376373, 100216001
Upstream gene distance
Downstream gene distance
SNP risk allelers2165953-G
SNPsrs2165953
Merged0
SNP id current2165953
Contextintron_variant
Intergenic0
Allele frequency0.153
P value0.000009
Pvalue mlog5.04575749056067
P value text(Sedentary activity )
Or beta0.02
%95 Ci[NR] min/d increase
PlatformIllumina [899892]
CNVN
Mapped traitphysical activity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003940
Study accessionGCST001762