Human SNP ID | rs2163950 |
---|---|
Human chromosome | chr8 |
Human SNP position | 129585339 |
Pig chromosome | chr4 |
Pig SNP position | 11175163 |
PubMed ID | 25096241 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25096241 |
Study | Trans-ethnic meta-analysis of white blood cell phenotypes. |
Disease/Trait | White blood cell count |
Initial sample | 16,843 Japanese ancestry individuals, 19,509 European ancestry individuals, 16,388 African American individuals |
Replication sample | NA |
Region | 8q24.21 |
Chromosome id | chr8 |
Chromosome position | 129585339 |
Reported gene | intergenic |
Mapped gene | CCDC26 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 137196 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2163950-A |
SNPs | rs2163950 |
Merged | 0 |
SNP id current | 2163950 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.174 |
P value | 0.000000005 |
Pvalue mlog | 8.30102999566398 |
P value text | (Japanese) |
Or beta | 0.021 |
%95 Ci | [0.013-0.029] unit decrease |
Platform | Illumina [NR] (imputed) |
CNV | N |
Mapped trait | leukocyte count |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004308 |
Study accession | GCST002556 |
PubMed ID | 25096241 |
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25096241 |
Study | Trans-ethnic meta-analysis of white blood cell phenotypes. |
Disease/Trait | White blood cell count |
Initial sample | 16,843 Japanese ancestry individuals, 19,509 European ancestry individuals, 16,388 African American individuals |
Replication sample | NA |
Region | 8q24.21 |
Chromosome id | chr8 |
Chromosome position | 129585339 |
Reported gene | intergenic |
Mapped gene | CCDC26 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 137196 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2163950-? |
SNPs | rs2163950 |
Merged | 0 |
SNP id current | 2163950 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000000002 |
Pvalue mlog | 8.69897000433601 |
P value text | |
Or beta | 0.0167 |
%95 Ci | [0.011-0.022] unit decrease |
Platform | Illumina [NR] (imputed) |
CNV | N |
Mapped trait | leukocyte count |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004308 |
Study accession | GCST002556 |