SNP Detail For rs2155929
1.Mapping Information
Human SNP ID rs2155929
Human chromosome chr18
Human SNP position 29026683
Pig chromosome chr6
Pig SNP position 106213363
2.Annotation Information
PubMed ID22365631
JournalBiol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/22365631
StudyGenome-wide association study of temperament in bipolar disorder reveals significant associations with three novel Loci.
Disease/TraitTemperament (bipolar disorder)
Initial sample1,263 European ancestry cases, 1,434 European ancestry controls
Replication sampleNA
Region18q12.1
Chromosome idchr18
Chromosome position29026683
Reported geneCDH2
Mapped geneLOC105372043 - LOC105372044
Upstream gene id105372043
Downstream gene id105372044
SNP gene ids
Upstream gene distance301916
Downstream gene distance154059
SNP risk allelers2155929-?
SNPsrs2155929
Merged0
SNP id current2155929
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text(Dysthymic)
Or beta1.01
%95 Ci[NR] unit increase
PlatformAffymetrix [703012]
CNVN
Mapped traitbehavior or behavioral disorder measurement, personality trait, bipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004782, http://www.ebi.ac.uk/efo/EFO_0004365, http://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST001419