Human SNP ID | rs2143963 |
---|---|
Human chromosome | chr14 |
Human SNP position | 54257205 |
Pig chromosome | chr1 |
Pig SNP position | 204172737 |
PubMed ID | 23934736 |
---|---|
Journal | Genet Epidemiol |
Link | www.ncbi.nlm.nih.gov/pubmed/23934736 |
Study | Genome-wide association study of a heart failure related metabolomic profile among African Americans in the Atherosclerosis Risk in Communities (ARIC) study. |
Disease/Trait | Metabolite levels (X-11787) |
Initial sample | 1,260 African American individuals |
Replication sample | NA |
Region | 14q22.2 |
Chromosome id | chr14 |
Chromosome position | 54257205 |
Reported gene | CDKN3 |
Mapped gene | LOC105370507 - CDKN3 |
Upstream gene id | 105370507 |
Downstream gene id | 1033 |
SNP gene ids | |
Upstream gene distance | 68726 |
Downstream gene distance | 139729 |
SNP risk allele | rs2143963-C |
SNPs | rs2143963 |
Merged | 0 |
SNP id current | 2143963 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | 0.07 |
%95 Ci | [0.04-0.10] unit increase |
Platform | Affymetrix [~ 2500000] (imputed) |
CNV | N |
Mapped trait | hydroxy-leucine measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005276 |
Study accession | GCST002119 |