SNP Detail For rs2135319
1.Mapping Information
Human SNP ID rs2135319
Human chromosome chr3
Human SNP position 71974549
Pig chromosome chr13
Pig SNP position 59055264
2.Annotation Information
PubMed ID22085899
JournalEur J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22085899
StudyUGT1A1 is a major locus influencing bilirubin levels in African Americans.
Disease/TraitBilirubin levels
Initial sample619 African American individuals
Replication sampleNA
Region3p13
Chromosome idchr3
Chromosome position71974549
Reported geneRP11-648C16.1
Mapped geneLOC105377156 - LOC105377157
Upstream gene id105377156
Downstream gene id105377157
SNP gene ids
Upstream gene distance185175
Downstream gene distance19150
SNP risk allelers2135319-A
SNPsrs2135319
Merged0
SNP id current2135319
Contextintergenic_variant
Intergenic1
Allele frequency0.081
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.194
%95 Ci[0.112-0.276] unit increase
PlatformAffymetrix [808465]
CNVN
Mapped traitbilirubin measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004570
Study accessionGCST001324