Human SNP ID | rs2135319 |
---|---|
Human chromosome | chr3 |
Human SNP position | 71974549 |
Pig chromosome | chr13 |
Pig SNP position | 59055264 |
PubMed ID | 22085899 |
---|---|
Journal | Eur J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22085899 |
Study | UGT1A1 is a major locus influencing bilirubin levels in African Americans. |
Disease/Trait | Bilirubin levels |
Initial sample | 619 African American individuals |
Replication sample | NA |
Region | 3p13 |
Chromosome id | chr3 |
Chromosome position | 71974549 |
Reported gene | RP11-648C16.1 |
Mapped gene | LOC105377156 - LOC105377157 |
Upstream gene id | 105377156 |
Downstream gene id | 105377157 |
SNP gene ids | |
Upstream gene distance | 185175 |
Downstream gene distance | 19150 |
SNP risk allele | rs2135319-A |
SNPs | rs2135319 |
Merged | 0 |
SNP id current | 2135319 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.081 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 0.194 |
%95 Ci | [0.112-0.276] unit increase |
Platform | Affymetrix [808465] |
CNV | N |
Mapped trait | bilirubin measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004570 |
Study accession | GCST001324 |