Human SNP ID | rs2122554 |
---|---|
Human chromosome | chr5 |
Human SNP position | 166530081 |
Pig chromosome | chr16 |
Pig SNP position | 62096699 |
PubMed ID | 20585324 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/20585324 |
Study | Genome-wide association study of conduct disorder symptomatology. |
Disease/Trait | Conduct disorder (symptom count) |
Initial sample | 872 European, African American and other ancestry substance dependence cases, 3,091 European, African American and other ancestry controls |
Replication sample | NA |
Region | 5q34 |
Chromosome id | chr5 |
Chromosome position | 166530081 |
Reported gene | intergenic |
Mapped gene | LOC105377705 - LOC105377706 |
Upstream gene id | 105377705 |
Downstream gene id | 105377706 |
SNP gene ids | |
Upstream gene distance | 296706 |
Downstream gene distance | 315540 |
SNP risk allele | rs2122554-A |
SNPs | rs2122554 |
Merged | 0 |
SNP id current | 2122554 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.162 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 0.1 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [948658] |
CNV | N |
Mapped trait | conduct disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004216 |
Study accession | GCST000713 |