SNP Detail For rs212016
1.Mapping Information
Human SNP ID rs212016
Human chromosome chr3
Human SNP position 59995799
Pig chromosome chr13
Pig SNP position 45808606
2.Annotation Information
PubMed ID22419666
JournalAm J Med Genet A
Linkwww.ncbi.nlm.nih.gov/pubmed/22419666
StudyGenome wide study of maternal and parent-of-origin effects on the etiology of orofacial clefts.
Disease/TraitOrofacial clefts
Initial sample1,094 European ancestry triads, 1,277 Asian ancestry triads, 87 triads
Replication sampleNA
Region3p14.2
Chromosome idchr3
Chromosome position59995799
Reported geneFHIT
Mapped geneFHIT
Upstream gene id
Downstream gene id
SNP gene ids2272
Upstream gene distance
Downstream gene distance
SNP risk allelers212016-?
SNPsrs212016
Merged0
SNP id current212016
Contextintron_variant
Intergenic0
Allele frequency0.69
P value0.000007
Pvalue mlog5.15490195998574
P value text(CL)
Or beta1.54
%95 Ci[1.89-1.27]
PlatformIllumina [NR]
CNVN
Mapped traitOrofacial clefting syndrome
Mapped trait URIhttp://www.orpha.net/ORDO/Orphanet_139039
Study accessionGCST001442