Human SNP ID | rs211718 |
---|---|
Human chromosome | chr1 |
Human SNP position | 75640990 |
Pig chromosome | chr15 |
Pig SNP position | 117334558 |
PubMed ID | 21886157 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/21886157 |
Study | Human metabolic individuality in biomedical and pharmaceutical research. |
Disease/Trait | Metabolic traits |
Initial sample | 2,820 European ancestry individuals |
Replication sample | NA |
Region | 1p31.1 |
Chromosome id | chr1 |
Chromosome position | 75640990 |
Reported gene | ACADM |
Mapped gene | SLC44A5 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 204962 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs211718-T |
SNPs | rs211718 |
Merged | 0 |
SNP id current | 211718 |
Context | downstream_gene_variant |
Intergenic | 0 |
Allele frequency | 0.304 |
P value | 2E-71 |
Pvalue mlog | 70.698970004336 |
P value text | (SM-5 + 17 other traits) |
Or beta | 0.16 |
%95 Ci | [NR] unit decrease |
Platform | Affymetrix, Illumina [534665] |
CNV | N |
Mapped trait | metabolite measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004725 |
Study accession | GCST001217 |
PubMed ID | 20037589 |
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20037589 |
Study | A genome-wide perspective of genetic variation in human metabolism. |
Disease/Trait | Metabolite levels |
Initial sample | 1,029 European ancestry individuals |
Replication sample | 1,202 European ancestry individuals |
Region | 1p31.1 |
Chromosome id | chr1 |
Chromosome position | 75640990 |
Reported gene | ACADM |
Mapped gene | SLC44A5 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 204962 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs211718-C |
SNPs | rs211718 |
Merged | 0 |
SNP id current | 211718 |
Context | downstream_gene_variant |
Intergenic | 0 |
Allele frequency | 0.31 |
P value | 1E-63 |
Pvalue mlog | 63 |
P value text | (C12/C10) |
Or beta | 14.6 |
%95 Ci | [NR] % variance |
Platform | Affymetrix [517480] |
CNV | N |
Mapped trait | metabolite measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004725 |
Study accession | GCST000550 |