Human SNP ID | rs2108258 |
---|---|
Human chromosome | chr7 |
Human SNP position | 20752375 |
Pig chromosome | chr9 |
Pig SNP position | 99030562 |
PubMed ID | 23259602 |
---|---|
Journal | BMC Oral Health |
Link | www.ncbi.nlm.nih.gov/pubmed/23259602 |
Study | Genome-wide association scan of dental caries in the permanent dentition. |
Disease/Trait | Dental caries |
Initial sample | 1,483 European ancestry comparatively younger individuals, 5,960 European ancestry comparatively older individuals |
Replication sample | NA |
Region | 7p21.1 |
Chromosome id | chr7 |
Chromosome position | 20752375 |
Reported gene | ABCB5 |
Mapped gene | ABCB5 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 340273 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2108258-? |
SNPs | rs2108258 |
Merged | 0 |
SNP id current | 2108258 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (Comparatively Older) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [~ 1400000] (imputed) |
CNV | N |
Mapped trait | dental caries |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003819 |
Study accession | GCST001786 |