SNP Detail For rs2086512
1.Mapping Information
Human SNP ID rs2086512
Human chromosome chr6
Human SNP position 98563625
Pig chromosome chr1
Pig SNP position 74143920
2.Annotation Information
PubMed ID21993531
JournalGenes Immun
Linkwww.ncbi.nlm.nih.gov/pubmed/21993531
StudyGenome-wide association study does not reveal major genetic determinants for anti-cytomegalovirus antibody response.
Disease/TraitCytomegalovirus antibody response
Initial sample1,485 European ancestry sero-postitive individuals, 648 European ancestry sero-negative individuals
Replication sampleNA
Region6q16.1
Chromosome idchr6
Chromosome position98563625
Reported geneintergenic
Mapped geneLOC105377910 - POU3F2
Upstream gene id105377910
Downstream gene id5454
SNP gene ids
Upstream gene distance43783
Downstream gene distance271079
SNP risk allelers2086512-A
SNPsrs2086512
Merged0
SNP id current2086512
Contextintergenic_variant
Intergenic1
Allele frequency0.06
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta0.324
%95 Ci[0.18-0.47] unit increase
PlatformIllumina [546677]
CNVN
Mapped traitresponse to virus
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0009615
Study accessionGCST001272