Human SNP ID | rs2079742 |
---|---|
Human chromosome | chr17 |
Human SNP position | 61388336 |
Pig chromosome | chr12 |
Pig SNP position | 38350108 |
PubMed ID | 23263486 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23263486 |
Study | Genome-wide association analyses identify 18 new loci associated with serum urate concentrations. |
Disease/Trait | Urate levels |
Initial sample | 49,825 European ancestry males, 60,522 European ancestry females |
Replication sample | Up to 32,813 European ancestry individuals |
Region | 17q23.2 |
Chromosome id | chr17 |
Chromosome position | 61388336 |
Reported gene | BCAS3, C17orf82 |
Mapped gene | BCAS3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 54828 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2079742-T |
SNPs | rs2079742 |
Merged | 0 |
SNP id current | 2079742 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | 0.85 |
P value | 0.00000001 |
Pvalue mlog | 8 |
P value text | |
Or beta | 0.043 |
%95 Ci | [0.027-0.059] mg/dl increase |
Platform | Affymetrix, Illumina, Perlegen [2450547] (imputed) |
CNV | N |
Mapped trait | urate measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004531 |
Study accession | GCST001791 |