Human SNP ID | rs2076530 |
---|---|
Human chromosome | chr6 |
Human SNP position | 32396039 |
Pig chromosome | chr7 |
Pig SNP position | 29006359 |
PubMed ID | 22936702 |
---|---|
Journal | Eur Respir J |
Link | www.ncbi.nlm.nih.gov/pubmed/22936702 |
Study | Genome-wide association analysis reveals 12q13.3-q14.1 as new risk locus for sarcoidosis. |
Disease/Trait | Sarcoidosis |
Initial sample | 637 European ancestry cases, 1,233 European ancestry controls |
Replication sample | 3,121 European ancestry cases, 4,284 European ancestry controls |
Region | 6p21.32 |
Chromosome id | chr6 |
Chromosome position | 32396039 |
Reported gene | BTNL2 |
Mapped gene | BTNL2, LOC101929163 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 56244, 101929163 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2076530-? |
SNPs | rs2076530 |
Merged | 0 |
SNP id current | 2076530 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.00000000003 |
Pvalue mlog | 10.5228787452803 |
P value text | (Chronic) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [677619] |
CNV | N |
Mapped trait | Sarcoidosis |
Mapped trait URI | http://www.orpha.net/ORDO/Orphanet_797 |
Study accession | GCST001654 |