Human SNP ID | rs2076346 |
---|---|
Human chromosome | chr1 |
Human SNP position | 23757159 |
Pig chromosome | chr6 |
Pig SNP position | 75448538 |
PubMed ID | 25574825 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25574825 |
Study | Genome-wide Comparative Analysis of Atopic Dermatitis and Psoriasis Gives Insight into Opposing Genetic Mechanisms. |
Disease/Trait | Inflammatory skin disease |
Initial sample | 2,079 European ancestry atopic dermatitis cases, 4,212 European ancestry psoriasis cases, 11,899 European ancestry controls |
Replication sample | NA |
Region | 1p36.11 |
Chromosome id | chr1 |
Chromosome position | 23757159 |
Reported gene | TCEB3 |
Mapped gene | TCEB3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 6924 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2076346-? |
SNPs | rs2076346 |
Merged | 0 |
SNP id current | 2076346 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.00000000001 |
Pvalue mlog | 11 |
P value text | (Psoriasis) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [~ 5200000] |
CNV | N |
Mapped trait | psoriasis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000676 |
Study accession | GCST002740 |