SNP Detail For rs2076346
1.Mapping Information
Human SNP ID rs2076346
Human chromosome chr1
Human SNP position 23757159
Pig chromosome chr6
Pig SNP position 75448538
2.Annotation Information
PubMed ID25574825
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25574825
StudyGenome-wide Comparative Analysis of Atopic Dermatitis and Psoriasis Gives Insight into Opposing Genetic Mechanisms.
Disease/TraitInflammatory skin disease
Initial sample2,079 European ancestry atopic dermatitis cases, 4,212 European ancestry psoriasis cases, 11,899 European ancestry controls
Replication sampleNA
Region1p36.11
Chromosome idchr1
Chromosome position23757159
Reported geneTCEB3
Mapped geneTCEB3
Upstream gene id
Downstream gene id
SNP gene ids6924
Upstream gene distance
Downstream gene distance
SNP risk allelers2076346-?
SNPsrs2076346
Merged0
SNP id current2076346
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.00000000001
Pvalue mlog11
P value text(Psoriasis)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [~ 5200000]
CNVN
Mapped traitpsoriasis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000676
Study accessionGCST002740