SNP Detail For rs2074552
1.Mapping Information
Human SNP ID rs2074552
Human chromosome chr19
Human SNP position 2214058
Pig chromosome chr2
Pig SNP position 77065443
2.Annotation Information
PubMed ID26584805
JournalGenes Nutr
Linkwww.ncbi.nlm.nih.gov/pubmed/26584805
StudyA genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population.
Disease/TraitPlasma omega-6 polyunsaturated fatty acid levels (gamma-linolenic acid)
Initial sample717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls
Replication sampleNA
Region19p13.3
Chromosome idchr19
Chromosome position2214058
Reported geneNR
Mapped geneDOT1L
Upstream gene id
Downstream gene id
SNP gene ids84444
Upstream gene distance
Downstream gene distance
SNP risk allelers2074552-T
SNPsrs2074552
Merged
SNP id current2074552
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.4791
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.1056
%95 Ci[0.062-0.149] unit decrease
PlatformIllumina [up to 1980188] (imputed)
CNVN
Mapped trait
Mapped trait URI
Study accessionGCST003238